Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.21□□□□□ -0.13
Clrn1Q8K445 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.21□□□□□ -0.13
Clrn1Q8K445 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Clrn1Q8K445 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.2□□□□□ -0.14
Clrn1Q8K445 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn1Q8K445 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Gm18246-201ENSMUST00000221023 728 ntBASIC14.19□□□□□ -0.14
Clrn1Q8K445 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.19□□□□□ -0.14
Clrn1Q8K445 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn1Q8K445 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms