Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm27704-201ENSMUST00000185094 107 ntBASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm45328-201ENSMUST00000210942 917 ntBASIC9.48□□□□□ -0.89
Cystm1Q8K353 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.48□□□□□ -0.89
Cystm1Q8K353 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm6198-201ENSMUST00000191337 2929 ntBASIC9.48□□□□□ -0.89
Cystm1Q8K353 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Gm9103-201ENSMUST00000119371 405 ntBASIC9.47□□□□□ -0.89
Cystm1Q8K353 Gm7284-201ENSMUST00000131667 944 ntBASIC9.47□□□□□ -0.89
Cystm1Q8K353 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cystm1Q8K353 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms