Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm7222-201ENSMUST00000117512 906 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm27459-201ENSMUST00000184860 107 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm9682-201ENSMUST00000197505 556 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm34391-201ENSMUST00000203706 907 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cchcr1Q8K2I2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cchcr1Q8K2I2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Rps4l-201ENSMUST00000071745 943 ntBASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cchcr1Q8K2I2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms