Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgcs1Q8JZK9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hmgcs1Q8JZK9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgcs1Q8JZK9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgcs1Q8JZK9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms