Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip3Q8CHD8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip3Q8CHD8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip3Q8CHD8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab11fip3Q8CHD8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.39■□□□□ 0.7
Rab11fip3Q8CHD8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab11fip3Q8CHD8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Rab11fip3Q8CHD8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab11fip3Q8CHD8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Gm18049-201ENSMUST00000208909 581 ntBASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.38■□□□□ 0.69
Rab11fip3Q8CHD8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms