Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ShfQ8CG80 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ShfQ8CG80 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.42□□□□□ -0.26
ShfQ8CG80 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.42□□□□□ -0.26
ShfQ8CG80 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.42□□□□□ -0.26
ShfQ8CG80 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.42□□□□□ -0.26
ShfQ8CG80 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
ShfQ8CG80 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.42□□□□□ -0.26
ShfQ8CG80 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ShfQ8CG80 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.42□□□□□ -0.26
ShfQ8CG80 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
ShfQ8CG80 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ShfQ8CG80 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShfQ8CG80 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.41□□□□□ -0.26
ShfQ8CG80 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.41□□□□□ -0.26
ShfQ8CG80 Gm4535-201ENSMUST00000182274 558 ntBASIC13.41□□□□□ -0.26
ShfQ8CG80 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Gm10355-201ENSMUST00000097146 517 ntBASIC13.41□□□□□ -0.26
ShfQ8CG80 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.41□□□□□ -0.26
ShfQ8CG80 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShfQ8CG80 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ShfQ8CG80 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.4□□□□□ -0.26
ShfQ8CG80 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.4□□□□□ -0.26
ShfQ8CG80 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms