Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.61■□□□□ 0.57
Smc5Q8CG46 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.61■□□□□ 0.57
Smc5Q8CG46 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc5Q8CG46 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Smc5Q8CG46 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Gm18489-201ENSMUST00000172565 551 ntBASIC18.6■□□□□ 0.57
Smc5Q8CG46 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.6■□□□□ 0.57
Smc5Q8CG46 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.6■□□□□ 0.57
Smc5Q8CG46 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Gm5682-201ENSMUST00000173402 505 ntBASIC18.59■□□□□ 0.57
Smc5Q8CG46 Gm4535-201ENSMUST00000182274 558 ntBASIC18.59■□□□□ 0.57
Smc5Q8CG46 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Gm10355-201ENSMUST00000097146 517 ntBASIC18.59■□□□□ 0.57
Smc5Q8CG46 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc5Q8CG46 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Smc5Q8CG46 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc5Q8CG46 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.58■□□□□ 0.56
Smc5Q8CG46 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms