Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm10355-201ENSMUST00000097146 517 ntBASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vcpip1Q8CDG3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Carlr-201ENSMUST00000181515 2574 ntBASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcpip1Q8CDG3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Gm27525-201ENSMUST00000184465 107 ntBASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms