Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Celf4-206ENSMUST00000224553 1729 ntBASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf31Q8CCF0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Gm16026-204ENSMUST00000162652 683 ntBASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf31Q8CCF0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf31Q8CCF0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm44335-201ENSMUST00000196879 141 ntBASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm44297-201ENSMUST00000198304 141 ntBASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm44346-201ENSMUST00000198851 141 ntBASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms