Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pabpc5Q8C7D3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Chchd1-203ENSMUST00000224633 557 ntBASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.13■□□□□ 0.01
Pabpc5Q8C7D3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pabpc5Q8C7D3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pabpc5Q8C7D3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms