Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Gm16215-201ENSMUST00000161990 637 ntBASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Gm43630-201ENSMUST00000201550 776 ntBASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Gm15321-201ENSMUST00000121290 288 ntBASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Gm6180-201ENSMUST00000065243 498 ntBASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a6Q8C6K9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Gm12859-201ENSMUST00000117834 427 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a6Q8C6K9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Mir7085-201ENSMUST00000184353 66 ntBASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a6Q8C6K9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms