Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Gm5264-201ENSMUST00000190584 848 ntBASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc60Q8C4J0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Gm8000-201ENSMUST00000188378 592 ntBASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.17■□□□□ 0.66
Ccdc60Q8C4J0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Gm16198-201ENSMUST00000118766 670 ntBASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Mir3113-201ENSMUST00000175478 76 ntBASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Thap2-203ENSMUST00000218989 527 ntBASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc60Q8C4J0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms