Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc30Q8BVF4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc30Q8BVF4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc30Q8BVF4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc30Q8BVF4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc30Q8BVF4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Gm17968-201ENSMUST00000194902 784 ntBASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc30Q8BVF4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Carlr-201ENSMUST00000181515 2574 ntBASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Gm5177-201ENSMUST00000183092 997 ntBASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc30Q8BVF4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc30Q8BVF4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc30Q8BVF4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms