Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap1Q8BTW8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm16026-204ENSMUST00000162652 683 ntBASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm18057-201ENSMUST00000208220 503 ntBASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap1Q8BTW8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm5312-201ENSMUST00000203728 547 ntBASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap1Q8BTW8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm43767-201ENSMUST00000198933 381 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms