Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf7Q8BTV2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf7Q8BTV2 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.08■□□□□ 0.01
Cpsf7Q8BTV2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf7Q8BTV2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.08■□□□□ 0.01
Cpsf7Q8BTV2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Cpsf7Q8BTV2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf7Q8BTV2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Gm15794-201ENSMUST00000120182 631 ntBASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Gm17807-201ENSMUST00000186869 298 ntBASIC15.08■□□□□ 0
Cpsf7Q8BTV2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf7Q8BTV2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Gm27742-201ENSMUST00000184667 60 ntBASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf7Q8BTV2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms