Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Gm27525-201ENSMUST00000184465 107 ntBASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Gm6443-201ENSMUST00000203599 874 ntBASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf4Q8BQZ5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 AV026068-213ENSMUST00000223675 1171 ntBASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4Q8BQZ5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4Q8BQZ5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4Q8BQZ5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4Q8BQZ5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.58□□□□□ -0.07
Cpsf4Q8BQZ5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Gm8344-201ENSMUST00000119813 856 ntBASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Gm1401-201ENSMUST00000122048 772 ntBASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms