Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VmacQ8BP01 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VmacQ8BP01 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.27■□□□□ 0.36
VmacQ8BP01 Gm15467-201ENSMUST00000120582 445 ntBASIC17.27■□□□□ 0.36
VmacQ8BP01 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.27■□□□□ 0.36
VmacQ8BP01 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VmacQ8BP01 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.27■□□□□ 0.36
VmacQ8BP01 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VmacQ8BP01 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VmacQ8BP01 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VmacQ8BP01 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VmacQ8BP01 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VmacQ8BP01 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VmacQ8BP01 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
VmacQ8BP01 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.26■□□□□ 0.35
VmacQ8BP01 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Efs-202ENSMUST00000227037 2540 ntBASIC17.26■□□□□ 0.35
VmacQ8BP01 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VmacQ8BP01 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VmacQ8BP01 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Mir3113-201ENSMUST00000175478 76 ntBASIC17.26■□□□□ 0.35
VmacQ8BP01 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.26■□□□□ 0.35
VmacQ8BP01 Gm43514-201ENSMUST00000198852 424 ntBASIC17.26■□□□□ 0.35
VmacQ8BP01 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.26■□□□□ 0.35
VmacQ8BP01 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VmacQ8BP01 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VmacQ8BP01 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Gm27525-201ENSMUST00000184465 107 ntBASIC17.25■□□□□ 0.35
VmacQ8BP01 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.25■□□□□ 0.35
VmacQ8BP01 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.25■□□□□ 0.35
VmacQ8BP01 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VmacQ8BP01 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VmacQ8BP01 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.24■□□□□ 0.35
VmacQ8BP01 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
VmacQ8BP01 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Gm8749-201ENSMUST00000117737 331 ntBASIC17.24■□□□□ 0.35
VmacQ8BP01 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Gm44492-201ENSMUST00000197012 141 ntBASIC17.24■□□□□ 0.35
VmacQ8BP01 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.24■□□□□ 0.35
VmacQ8BP01 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VmacQ8BP01 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VmacQ8BP01 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VmacQ8BP01 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms