Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf18Q8BM39 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Gm7977-201ENSMUST00000193787 748 ntBASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.34□□□□□ -0.11
Prpf18Q8BM39 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf18Q8BM39 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf18Q8BM39 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf18Q8BM39 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf18Q8BM39 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf18Q8BM39 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf18Q8BM39 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Prpf18Q8BM39 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms