Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.39□□□□□ -0.11
SynbQ8BI41 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SynbQ8BI41 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.38□□□□□ -0.11
SynbQ8BI41 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.38□□□□□ -0.11
SynbQ8BI41 Gm19164-201ENSMUST00000210667 640 ntBASIC14.38□□□□□ -0.11
SynbQ8BI41 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.38□□□□□ -0.11
SynbQ8BI41 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SynbQ8BI41 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SynbQ8BI41 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.38□□□□□ -0.11
SynbQ8BI41 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SynbQ8BI41 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
SynbQ8BI41 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SynbQ8BI41 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.37□□□□□ -0.11
SynbQ8BI41 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.37□□□□□ -0.11
SynbQ8BI41 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SynbQ8BI41 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.37□□□□□ -0.11
SynbQ8BI41 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SynbQ8BI41 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SynbQ8BI41 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SynbQ8BI41 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SynbQ8BI41 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SynbQ8BI41 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SynbQ8BI41 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SynbQ8BI41 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SynbQ8BI41 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms