Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nod1Q8BHB0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Gm12151-201ENSMUST00000121374 290 ntBASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nod1Q8BHB0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Gm27618-201ENSMUST00000183671 60 ntBASIC15.77■□□□□ 0.12
Nod1Q8BHB0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nod1Q8BHB0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nod1Q8BHB0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nod1Q8BHB0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.77■□□□□ 0.11
Nod1Q8BHB0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Nod1Q8BHB0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Gm13223-201ENSMUST00000118609 747 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Gm15693-201ENSMUST00000120470 637 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nod1Q8BHB0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms