Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Gm6443-201ENSMUST00000203599 874 ntBASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Samm50Q8BGH2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Samm50Q8BGH2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Samm50Q8BGH2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Samm50Q8BGH2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Gm8344-201ENSMUST00000119813 856 ntBASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Samm50Q8BGH2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Gm6550-201ENSMUST00000187574 993 ntBASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Samm50Q8BGH2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Gm7222-201ENSMUST00000117512 906 ntBASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms