Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf187Q8BFX1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf187Q8BFX1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf187Q8BFX1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Ank2-226ENSMUST00000189368 339 ntBASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf187Q8BFX1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Gm12497-201ENSMUST00000138778 237 ntBASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf187Q8BFX1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf187Q8BFX1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf187Q8BFX1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Rnf187Q8BFX1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf187Q8BFX1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms