Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Gm15165-201ENSMUST00000118140 502 ntBASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3bQ80YF6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Gm8318-201ENSMUST00000182954 872 ntBASIC12.72□□□□□ -0.37
Upk3bQ80YF6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Upk3bQ80YF6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Gm4459-201ENSMUST00000118750 468 ntBASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Gm10231-201ENSMUST00000181584 441 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms