Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp6nlQ80XC3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp6nlQ80XC3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp6nlQ80XC3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Gm9063-201ENSMUST00000223299 582 ntBASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp6nlQ80XC3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp6nlQ80XC3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp6nlQ80XC3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp6nlQ80XC3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp6nlQ80XC3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms