Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ush1gQ80T11 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ush1gQ80T11 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ush1gQ80T11 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ush1gQ80T11 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ush1gQ80T11 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.44■□□□□ 0.22
Ush1gQ80T11 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ush1gQ80T11 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm25287-201ENSMUST00000103846 110 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm22918-201ENSMUST00000103855 110 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Gm27622-201ENSMUST00000183779 60 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Mir6977-201ENSMUST00000184960 64 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.43■□□□□ 0.22
Ush1gQ80T11 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ush1gQ80T11 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ush1gQ80T11 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms