Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.28□□□□□ -0.44
Vma21Q78T54 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vma21Q78T54 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vma21Q78T54 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vma21Q78T54 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vma21Q78T54 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Vma21Q78T54 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Vma21Q78T54 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vma21Q78T54 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Gm7506-201ENSMUST00000207758 815 ntBASIC12.27□□□□□ -0.45
Vma21Q78T54 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.27□□□□□ -0.45
Vma21Q78T54 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.27□□□□□ -0.45
Vma21Q78T54 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.27□□□□□ -0.45
Vma21Q78T54 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vma21Q78T54 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Gm27704-201ENSMUST00000185094 107 ntBASIC12.26□□□□□ -0.45
Vma21Q78T54 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.26□□□□□ -0.45
Vma21Q78T54 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.26□□□□□ -0.45
Vma21Q78T54 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vma21Q78T54 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vma21Q78T54 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vma21Q78T54 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Gm15372-201ENSMUST00000120729 834 ntBASIC12.25□□□□□ -0.45
Vma21Q78T54 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.25□□□□□ -0.45
Vma21Q78T54 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms