Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Gm42612-201ENSMUST00000197986 623 ntBASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Gm43170-201ENSMUST00000199827 612 ntBASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx55Q6ZPL9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx55Q6ZPL9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx55Q6ZPL9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx55Q6ZPL9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx55Q6ZPL9 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.02■□□□□ 0.31
Ddx55Q6ZPL9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx55Q6ZPL9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Gm6222-201ENSMUST00000120787 396 ntBASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Gm12138-201ENSMUST00000122180 951 ntBASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Gm27631-201ENSMUST00000184163 466 ntBASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx55Q6ZPL9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Gm19430-201ENSMUST00000193847 2137 ntBASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Ldb3-207ENSMUST00000227819 1499 ntBASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Gm18018-201ENSMUST00000198273 408 ntBASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Gm45098-201ENSMUST00000207179 657 ntBASIC17■□□□□ 0.31
Ddx55Q6ZPL9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx55Q6ZPL9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms