Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Gm9727-201ENSMUST00000161387 555 ntBASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcc2Q6PDG5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Gm15467-201ENSMUST00000120582 445 ntBASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcc2Q6PDG5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcc2Q6PDG5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Gm5264-201ENSMUST00000190584 848 ntBASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcc2Q6PDG5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc2Q6PDG5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc2Q6PDG5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc2Q6PDG5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.5■□□□□ 0.39
Smarcc2Q6PDG5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc2Q6PDG5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms