Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.85■□□□□ 0.29
Abcf1Q6P542 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.85■□□□□ 0.29
Abcf1Q6P542 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.85■□□□□ 0.29
Abcf1Q6P542 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.84■□□□□ 0.29
Abcf1Q6P542 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Gm9172-201ENSMUST00000212092 954 ntBASIC16.84■□□□□ 0.29
Abcf1Q6P542 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.84■□□□□ 0.29
Abcf1Q6P542 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Abcf1Q6P542 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abcf1Q6P542 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abcf1Q6P542 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abcf1Q6P542 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abcf1Q6P542 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
Abcf1Q6P542 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abcf1Q6P542 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.83■□□□□ 0.28
Abcf1Q6P542 Gm11452-201ENSMUST00000122376 690 ntBASIC16.83■□□□□ 0.28
Abcf1Q6P542 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Gm25406-201ENSMUST00000157599 105 ntBASIC16.83■□□□□ 0.28
Abcf1Q6P542 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.83■□□□□ 0.28
Abcf1Q6P542 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abcf1Q6P542 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.82■□□□□ 0.28
Abcf1Q6P542 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms