Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.01■□□□□ 0.63
Clcn1Q64347 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Gm6888-201ENSMUST00000221983 706 ntBASIC19.01■□□□□ 0.63
Clcn1Q64347 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.01■□□□□ 0.63
Clcn1Q64347 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn1Q64347 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Clcn1Q64347 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clcn1Q64347 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Gm23547-201ENSMUST00000158210 271 ntBASIC19■□□□□ 0.63
Clcn1Q64347 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Clcn1Q64347 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19■□□□□ 0.63
Clcn1Q64347 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19■□□□□ 0.63
Clcn1Q64347 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19■□□□□ 0.63
Clcn1Q64347 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19■□□□□ 0.63
Clcn1Q64347 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn1Q64347 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Clcn1Q64347 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Clcn1Q64347 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 Gm11424-201ENSMUST00000121929 829 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 Gm5866-201ENSMUST00000177881 973 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 Gm38225-201ENSMUST00000194001 393 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.99■□□□□ 0.63
Clcn1Q64347 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.99■□□□□ 0.63
Clcn1Q64347 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clcn1Q64347 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn1Q64347 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Clcn1Q64347 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn1Q64347 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn1Q64347 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn1Q64347 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clcn1Q64347 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.97■□□□□ 0.63
Clcn1Q64347 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.97■□□□□ 0.63
Clcn1Q64347 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn1Q64347 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn1Q64347 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn1Q64347 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn1Q64347 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms