Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.46□□□□□ -0.57
Zfp248Q640N4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Zfp248Q640N4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Zfp248Q640N4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Zfp248Q640N4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Zfp248Q640N4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.45□□□□□ -0.58
Zfp248Q640N4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm4535-201ENSMUST00000182274 558 ntBASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.45□□□□□ -0.58
Zfp248Q640N4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm10355-201ENSMUST00000097146 517 ntBASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Zfp248Q640N4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.44□□□□□ -0.58
Zfp248Q640N4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.44□□□□□ -0.58
Zfp248Q640N4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Gm27646-201ENSMUST00000183989 110 ntBASIC11.44□□□□□ -0.58
Zfp248Q640N4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Zfp248Q640N4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms