Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxn1Q61575 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Foxn1Q61575 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxn1Q61575 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxn1Q61575 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxn1Q61575 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxn1Q61575 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Gm9257-201ENSMUST00000221254 232 ntBASIC17.09■□□□□ 0.33
Foxn1Q61575 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Gm9797-201ENSMUST00000052902 613 ntBASIC17.09■□□□□ 0.33
Foxn1Q61575 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.09■□□□□ 0.33
Foxn1Q61575 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxn1Q61575 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxn1Q61575 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Foxn1Q61575 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.08■□□□□ 0.33
Foxn1Q61575 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxn1Q61575 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.08■□□□□ 0.33
Foxn1Q61575 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxn1Q61575 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxn1Q61575 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxn1Q61575 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Foxn1Q61575 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Foxn1Q61575 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Foxn1Q61575 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Foxn1Q61575 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Foxn1Q61575 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.08■□□□□ 0.32
Foxn1Q61575 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.08■□□□□ 0.32
Foxn1Q61575 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxn1Q61575 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.07■□□□□ 0.32
Foxn1Q61575 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.07■□□□□ 0.32
Foxn1Q61575 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.07■□□□□ 0.32
Foxn1Q61575 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.07■□□□□ 0.32
Foxn1Q61575 Gm21854-201ENSMUST00000179901 471 ntBASIC17.07■□□□□ 0.32
Foxn1Q61575 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.07■□□□□ 0.32
Foxn1Q61575 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.07■□□□□ 0.32
Foxn1Q61575 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxn1Q61575 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Foxn1Q61575 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Foxn1Q61575 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Foxn1Q61575 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxn1Q61575 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Foxn1Q61575 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Mir3102-201ENSMUST00000175555 104 ntBASIC17.06■□□□□ 0.32
Foxn1Q61575 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Gm16476-201ENSMUST00000221544 139 ntBASIC17.06■□□□□ 0.32
Foxn1Q61575 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.06■□□□□ 0.32
Foxn1Q61575 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Foxn1Q61575 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Foxn1Q61575 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxn1Q61575 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms