Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Foxd1Q61345 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxd1Q61345 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Foxd1Q61345 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Foxd1Q61345 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.33■□□□□ 0.37
Foxd1Q61345 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxd1Q61345 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.33■□□□□ 0.36
Foxd1Q61345 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 Gm8344-201ENSMUST00000119813 856 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Mir1982-201ENSMUST00000157368 74 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Foxd1Q61345 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Gm18753-201ENSMUST00000201000 566 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 Gm15823-201ENSMUST00000064305 670 ntBASIC17.33■□□□□ 0.36
Foxd1Q61345 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Foxd1Q61345 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Foxd1Q61345 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxd1Q61345 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Foxd1Q61345 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Foxd1Q61345 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.32■□□□□ 0.36
Foxd1Q61345 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Gm12957-201ENSMUST00000117835 377 ntBASIC17.32■□□□□ 0.36
Foxd1Q61345 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
Foxd1Q61345 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.32■□□□□ 0.36
Foxd1Q61345 Gm9002-201ENSMUST00000178437 499 ntBASIC17.32■□□□□ 0.36
Foxd1Q61345 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Foxd1Q61345 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.32■□□□□ 0.36
Foxd1Q61345 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxd1Q61345 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Foxd1Q61345 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Foxd1Q61345 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Foxd1Q61345 Gm24694-201ENSMUST00000180054 110 ntBASIC17.31■□□□□ 0.36
Foxd1Q61345 Gm27663-201ENSMUST00000184839 110 ntBASIC17.31■□□□□ 0.36
Foxd1Q61345 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.31■□□□□ 0.36
Foxd1Q61345 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxd1Q61345 Olfr582-201ENSMUST00000098212 960 ntBASIC17.31■□□□□ 0.36
Foxd1Q61345 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxd1Q61345 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Foxd1Q61345 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms