Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd3Q61060 Rps4l-201ENSMUST00000071745 943 ntBASIC13.83□□□□□ -0.2
Foxd3Q61060 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd3Q61060 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd3Q61060 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd3Q61060 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.83□□□□□ -0.2
Foxd3Q61060 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.83□□□□□ -0.2
Foxd3Q61060 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd3Q61060 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd3Q61060 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.82□□□□□ -0.2
Foxd3Q61060 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Gm15372-201ENSMUST00000120729 834 ntBASIC13.82□□□□□ -0.2
Foxd3Q61060 Gm7862-201ENSMUST00000121461 292 ntBASIC13.82□□□□□ -0.2
Foxd3Q61060 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Gm1401-201ENSMUST00000122048 772 ntBASIC13.82□□□□□ -0.2
Foxd3Q61060 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Gm5264-201ENSMUST00000190584 848 ntBASIC13.82□□□□□ -0.2
Foxd3Q61060 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.82□□□□□ -0.2
Foxd3Q61060 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd3Q61060 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxd3Q61060 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.81□□□□□ -0.2
Foxd3Q61060 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.81□□□□□ -0.2
Foxd3Q61060 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.81□□□□□ -0.2
Foxd3Q61060 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.81□□□□□ -0.2
Foxd3Q61060 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.81□□□□□ -0.2
Foxd3Q61060 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.81□□□□□ -0.2
Foxd3Q61060 Gm27702-201ENSMUST00000184512 56 ntBASIC13.81□□□□□ -0.2
Foxd3Q61060 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.81□□□□□ -0.2
Foxd3Q61060 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Foxd3Q61060 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Foxd3Q61060 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd3Q61060 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxd3Q61060 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Foxd3Q61060 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Efs-202ENSMUST00000227037 2540 ntBASIC13.8□□□□□ -0.2
Foxd3Q61060 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Foxd3Q61060 Gm8344-201ENSMUST00000119813 856 ntBASIC13.8□□□□□ -0.2
Foxd3Q61060 Gm12497-201ENSMUST00000138778 237 ntBASIC13.8□□□□□ -0.2
Foxd3Q61060 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.8□□□□□ -0.2
Foxd3Q61060 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.8□□□□□ -0.2
Foxd3Q61060 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.8□□□□□ -0.2
Foxd3Q61060 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd3Q61060 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms