Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.45□□□□□ -0.1
ClpbQ60649 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.45□□□□□ -0.1
ClpbQ60649 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
ClpbQ60649 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
ClpbQ60649 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ClpbQ60649 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ClpbQ60649 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.44□□□□□ -0.1
ClpbQ60649 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ClpbQ60649 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.44□□□□□ -0.1
ClpbQ60649 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Gm18489-201ENSMUST00000172565 551 ntBASIC14.44□□□□□ -0.1
ClpbQ60649 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.44□□□□□ -0.1
ClpbQ60649 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.44□□□□□ -0.1
ClpbQ60649 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.44□□□□□ -0.1
ClpbQ60649 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClpbQ60649 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ClpbQ60649 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ClpbQ60649 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.43□□□□□ -0.1
ClpbQ60649 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ClpbQ60649 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ClpbQ60649 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.43□□□□□ -0.1
ClpbQ60649 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ClpbQ60649 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.43□□□□□ -0.1
ClpbQ60649 Gm45167-201ENSMUST00000208007 322 ntBASIC14.43□□□□□ -0.1
ClpbQ60649 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ClpbQ60649 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.43□□□□□ -0.1
ClpbQ60649 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ClpbQ60649 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.43□□□□□ -0.1
ClpbQ60649 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClpbQ60649 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ClpbQ60649 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ClpbQ60649 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.42□□□□□ -0.1
ClpbQ60649 Gm15467-201ENSMUST00000120582 445 ntBASIC14.42□□□□□ -0.1
ClpbQ60649 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.42□□□□□ -0.1
ClpbQ60649 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.42□□□□□ -0.1
ClpbQ60649 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.42□□□□□ -0.1
ClpbQ60649 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ClpbQ60649 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms