Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm15039-201ENSMUST00000118914 875 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm10052-201ENSMUST00000168019 960 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm44430-201ENSMUST00000203376 995 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm7729-201ENSMUST00000050143 801 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav7d-4Q5R1H9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gm3375-201ENSMUST00000203929 796 ntBASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Odf3b-204ENSMUST00000227834 930 ntBASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7d-4Q5R1H9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav7d-4Q5R1H9 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms