Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Mir1199-201ENSMUST00000117015 119 ntBASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-3Q5R1C3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gm13168-201ENSMUST00000121771 632 ntBASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gm23547-201ENSMUST00000158210 271 ntBASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-3Q5R1C3 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms