Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.89□□□□□ -0.03
Scn2bQ56A07 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.89□□□□□ -0.03
Scn2bQ56A07 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.88□□□□□ -0.03
Scn2bQ56A07 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Gm8318-201ENSMUST00000182954 872 ntBASIC14.88□□□□□ -0.03
Scn2bQ56A07 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Celf4-206ENSMUST00000224553 1729 ntBASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn2bQ56A07 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Carlr-201ENSMUST00000181515 2574 ntBASIC14.87□□□□□ -0.03
Scn2bQ56A07 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn2bQ56A07 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.86□□□□□ -0.03
Scn2bQ56A07 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scn2bQ56A07 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.86□□□□□ -0.03
Scn2bQ56A07 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Gm13884-201ENSMUST00000118103 829 ntBASIC14.86□□□□□ -0.03
Scn2bQ56A07 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Scn2bQ56A07 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.86□□□□□ -0.03
Scn2bQ56A07 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.86□□□□□ -0.03
Scn2bQ56A07 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms