Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
R3hdm4Q4VBF2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
R3hdm4Q4VBF2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
R3hdm4Q4VBF2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
R3hdm4Q4VBF2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
R3hdm4Q4VBF2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm4Q4VBF2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm4Q4VBF2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm4Q4VBF2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm4Q4VBF2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm4Q4VBF2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms