Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsmem1Q3UQS2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lsmem1Q3UQS2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsmem1Q3UQS2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsmem1Q3UQS2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsmem1Q3UQS2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsmem1Q3UQS2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsmem1Q3UQS2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsmem1Q3UQS2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lsmem1Q3UQS2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsmem1Q3UQS2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsmem1Q3UQS2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lsmem1Q3UQS2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lsmem1Q3UQS2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms