Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Gm18889-201ENSMUST00000174284 929 ntBASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Naf1Q3UMQ8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Rprl2-201ENSMUST00000157150 290 ntBASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Mir6990-201ENSMUST00000183724 91 ntBASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Naf1Q3UMQ8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Naf1Q3UMQ8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Gm43474-201ENSMUST00000196415 774 ntBASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Naf1Q3UMQ8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms