Protein–RNA interactions for Protein: Q3UMB9

Washc4, WASH complex subunit 4, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Washc4Q3UMB9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm16198-201ENSMUST00000118766 670 ntBASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm18889-201ENSMUST00000174284 929 ntBASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Washc4Q3UMB9 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Washc4Q3UMB9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 AA543401-201ENSMUST00000164248 1269 ntBASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Gm43474-201ENSMUST00000196415 774 ntBASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Washc4Q3UMB9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Washc4Q3UMB9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms