Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Gm7862-201ENSMUST00000121461 292 ntBASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brf2Q3UAW9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.16□□□□□ -0.14
Brf2Q3UAW9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms