Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cul4aQ3TCH7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cul4aQ3TCH7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm14859-201ENSMUST00000117752 357 ntBASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms