Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.7□□□□□ -0.06
Col9a1Q05722 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Gm23931-201ENSMUST00000103842 109 ntBASIC14.69□□□□□ -0.06
Col9a1Q05722 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.69□□□□□ -0.06
Col9a1Q05722 Gm12997-201ENSMUST00000120207 640 ntBASIC14.69□□□□□ -0.06
Col9a1Q05722 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.69□□□□□ -0.06
Col9a1Q05722 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Gm45359-201ENSMUST00000210635 427 ntBASIC14.69□□□□□ -0.06
Col9a1Q05722 CT025561.1-201ENSMUST00000214972 674 ntBASIC14.69□□□□□ -0.06
Col9a1Q05722 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col9a1Q05722 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col9a1Q05722 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.69□□□□□ -0.06
Col9a1Q05722 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm12341-201ENSMUST00000119724 503 ntBASIC14.68□□□□□ -0.06
Col9a1Q05722 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm16026-204ENSMUST00000162652 683 ntBASIC14.68□□□□□ -0.06
Col9a1Q05722 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm27920-201ENSMUST00000183953 96 ntBASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm44387-201ENSMUST00000196298 145 ntBASIC14.68□□□□□ -0.06
Col9a1Q05722 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.68□□□□□ -0.06
Col9a1Q05722 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col9a1Q05722 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a1Q05722 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.67□□□□□ -0.06
Col9a1Q05722 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col9a1Q05722 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.67□□□□□ -0.06
Col9a1Q05722 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Gm8805-201ENSMUST00000117848 313 ntBASIC14.67□□□□□ -0.06
Col9a1Q05722 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.67□□□□□ -0.06
Col9a1Q05722 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC14.67□□□□□ -0.06
Col9a1Q05722 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.67□□□□□ -0.06
Col9a1Q05722 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.67□□□□□ -0.06
Col9a1Q05722 Gm42997-202ENSMUST00000200321 985 ntBASIC14.67□□□□□ -0.06
Col9a1Q05722 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.67□□□□□ -0.06
Col9a1Q05722 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
Col9a1Q05722 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a1Q05722 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.66□□□□□ -0.06
Col9a1Q05722 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a1Q05722 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.66□□□□□ -0.06
Col9a1Q05722 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col9a1Q05722 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a1Q05722 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a1Q05722 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.66□□□□□ -0.06
Col9a1Q05722 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a1Q05722 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a1Q05722 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a1Q05722 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.66□□□□□ -0.06
Col9a1Q05722 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms