Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.79□□□□□ -0.2
Scn1bP97952 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Scn1bP97952 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn1bP97952 Gm6257-201ENSMUST00000163864 910 ntBASIC13.79□□□□□ -0.2
Scn1bP97952 Mir6982-201ENSMUST00000184354 68 ntBASIC13.79□□□□□ -0.2
Scn1bP97952 Gm7889-201ENSMUST00000185591 958 ntBASIC13.79□□□□□ -0.2
Scn1bP97952 Gm29707-201ENSMUST00000196325 491 ntBASIC13.79□□□□□ -0.2
Scn1bP97952 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.79□□□□□ -0.2
Scn1bP97952 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Scn1bP97952 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1bP97952 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.78□□□□□ -0.2
Scn1bP97952 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn1bP97952 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn1bP97952 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm23547-201ENSMUST00000158210 271 ntBASIC13.78□□□□□ -0.2
Scn1bP97952 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.78□□□□□ -0.2
Scn1bP97952 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm43799-201ENSMUST00000201845 579 ntBASIC13.78□□□□□ -0.2
Scn1bP97952 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn1bP97952 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn1bP97952 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn1bP97952 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1bP97952 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn1bP97952 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.77□□□□□ -0.2
Scn1bP97952 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1bP97952 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Scn1bP97952 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1bP97952 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn1bP97952 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn1bP97952 Gm15565-201ENSMUST00000118890 427 ntBASIC13.77□□□□□ -0.21
Scn1bP97952 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn1bP97952 Gm26039-201ENSMUST00000158152 144 ntBASIC13.77□□□□□ -0.21
Scn1bP97952 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.77□□□□□ -0.21
Scn1bP97952 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn1bP97952 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scn1bP97952 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Scn1bP97952 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scn1bP97952 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Scn1bP97952 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1bP97952 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms