Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gbx1P82976 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.16□□□□□ -0.14
Gbx1P82976 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Gbx1P82976 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gbx1P82976 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.16□□□□□ -0.14
Gbx1P82976 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.16□□□□□ -0.14
Gbx1P82976 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Gbx1P82976 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gbx1P82976 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.15□□□□□ -0.14
Gbx1P82976 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.15□□□□□ -0.14
Gbx1P82976 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Gm10499-201ENSMUST00000174094 934 ntBASIC14.15□□□□□ -0.14
Gbx1P82976 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Gbx1P82976 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.15□□□□□ -0.14
Gbx1P82976 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.15□□□□□ -0.14
Gbx1P82976 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gbx1P82976 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gbx1P82976 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.15
Gbx1P82976 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gbx1P82976 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gbx1P82976 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gbx1P82976 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gbx1P82976 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Gbx1P82976 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gbx1P82976 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Gbx1P82976 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.14□□□□□ -0.15
Gbx1P82976 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.14□□□□□ -0.15
Gbx1P82976 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gbx1P82976 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Gbx1P82976 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gbx1P82976 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Gbx1P82976 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gbx1P82976 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gbx1P82976 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms