Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr4P70658 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr4P70658 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr4P70658 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.13□□□□□ -0.15
Cxcr4P70658 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.13□□□□□ -0.15
Cxcr4P70658 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr4P70658 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cxcr4P70658 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Gm11780-201ENSMUST00000136880 516 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cxcr4P70658 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Cxcr4P70658 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Mir5131-201ENSMUST00000175426 93 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 Gm6443-201ENSMUST00000203599 874 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 Gm18622-201ENSMUST00000219361 595 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cxcr4P70658 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cxcr4P70658 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.12□□□□□ -0.15
Cxcr4P70658 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cxcr4P70658 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr4P70658 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.11□□□□□ -0.15
Cxcr4P70658 Gm15173-201ENSMUST00000122049 433 ntBASIC14.11□□□□□ -0.15
Cxcr4P70658 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Cxcr4P70658 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.11□□□□□ -0.15
Cxcr4P70658 Gm6089-201ENSMUST00000197666 938 ntBASIC14.11□□□□□ -0.15
Cxcr4P70658 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.11□□□□□ -0.15
Cxcr4P70658 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.11□□□□□ -0.15
Cxcr4P70658 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cxcr4P70658 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cxcr4P70658 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cxcr4P70658 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcr4P70658 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.1□□□□□ -0.15
Cxcr4P70658 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcr4P70658 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcr4P70658 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcr4P70658 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcr4P70658 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcr4P70658 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcr4P70658 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms