Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Shox2P70390 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.88□□□□□ -0.03
Shox2P70390 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.88□□□□□ -0.03
Shox2P70390 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shox2P70390 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.88□□□□□ -0.03
Shox2P70390 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shox2P70390 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Shox2P70390 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Shox2P70390 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gm37722-201ENSMUST00000193757 208 ntBASIC14.87□□□□□ -0.03
Shox2P70390 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.87□□□□□ -0.03
Shox2P70390 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.87□□□□□ -0.03
Shox2P70390 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shox2P70390 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Shox2P70390 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.86□□□□□ -0.03
Shox2P70390 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Shox2P70390 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Shox2P70390 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shox2P70390 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Shox2P70390 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.85□□□□□ -0.03
Shox2P70390 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Shox2P70390 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.85□□□□□ -0.03
Shox2P70390 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.85□□□□□ -0.03
Shox2P70390 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.85□□□□□ -0.03
Shox2P70390 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Shox2P70390 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Shox2P70390 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.85□□□□□ -0.03
Shox2P70390 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Shox2P70390 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Shox2P70390 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms