Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rpl39P62892 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.74□□□□□ -0.69
Rpl39P62892 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.74□□□□□ -0.69
Rpl39P62892 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Rpl39P62892 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.74□□□□□ -0.69
Rpl39P62892 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.74□□□□□ -0.69
Rpl39P62892 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.74□□□□□ -0.69
Rpl39P62892 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.74□□□□□ -0.69
Rpl39P62892 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Mir770-201ENSMUST00000103252 94 ntBASIC10.74□□□□□ -0.69
Rpl39P62892 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.74□□□□□ -0.69
Rpl39P62892 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.74□□□□□ -0.69
Rpl39P62892 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.74□□□□□ -0.69
Rpl39P62892 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.74□□□□□ -0.69
Rpl39P62892 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.74□□□□□ -0.69
Rpl39P62892 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rpl39P62892 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.74□□□□□ -0.69
Rpl39P62892 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.74□□□□□ -0.69
Rpl39P62892 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rpl39P62892 Carlr-201ENSMUST00000181515 2574 ntBASIC10.73□□□□□ -0.69
Rpl39P62892 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Gm25406-201ENSMUST00000157599 105 ntBASIC10.73□□□□□ -0.69
Rpl39P62892 Gm22240-201ENSMUST00000175225 82 ntBASIC10.73□□□□□ -0.69
Rpl39P62892 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.73□□□□□ -0.69
Rpl39P62892 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Rpl39P62892 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.73□□□□□ -0.69
Rpl39P62892 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.73□□□□□ -0.69
Rpl39P62892 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.73□□□□□ -0.69
Rpl39P62892 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.73□□□□□ -0.69
Rpl39P62892 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.73□□□□□ -0.69
Rpl39P62892 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rpl39P62892 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rpl39P62892 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rpl39P62892 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.73□□□□□ -0.69
Rpl39P62892 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rpl39P62892 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.72□□□□□ -0.69
Rpl39P62892 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rpl39P62892 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rpl39P62892 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rpl39P62892 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms